# Generated by roxygen2: do not edit by hand S3method(merge,gct) S3method(subset,gct) S3method(update,gctx) export("ids<-") export("mat<-") export("meta<-") export(GCT) export(align_matrices) export(annotate.gct) export(annotate_gct) export(append.dim) export(check_colnames) export(check_dups) export(distil) export(extract.gct) export(extract_gct) export(fix.datatypes) export(ids) export(is.wholenumber) export(lxb2mat) export(mat) export(melt.gct) export(melt_gct) export(merge_gct) export(meta) export(na_pad_matrix) export(parse.gctx) export(parse.gmt) export(parse.gmx) export(parse.grp) export(parse_gctx) export(parse_gmt) export(parse_gmx) export(parse_grp) export(rank.gct) export(rank_gct) export(read.gctx.ids) export(read.gctx.meta) export(read_gctx_ids) export(read_gctx_meta) export(robust_zscore) export(subset_gct) export(threshold) export(transpose.gct) export(transpose_gct) export(update_gctx) export(write.gct) export(write.gctx) export(write.gctx.meta) export(write.tbl) export(write_gct) export(write_gctx) export(write_gmt) export(write_grp) export(write_tbl) importFrom(SummarizedExperiment,SummarizedExperiment) importFrom(flowCore,exprs) importFrom(flowCore,read.FCS) importFrom(matrixStats,colAnyNAs) importFrom(matrixStats,colRanks) importFrom(matrixStats,rowRanks) importFrom(methods,new) importFrom(methods,validObject)