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Yunpeng Cai
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2020 – today
- 2025
- [j29]Limai Jiang
, Yunpeng Cai:
MCU-RE: Integrating visual state space and local dependencies for retinal edema segmentation. Biomed. Signal Process. Control. 105: 107519 (2025) - [j28]Huazhen Huang, Xianguo Shi, Hongyang Lei
, Fan Hu
, Yunpeng Cai:
ProtChat: An AI Multi-Agent for Automated Protein Analysis Leveraging GPT-4 and Protein Language Model. J. Chem. Inf. Model. 65(1): 62-70 (2025) - 2024
- [j27]Zhenzhen Du, Shuang Wang, Ouzhou Yang, Juan He, Yujie Yang, Jing Zheng, Honglei Zhao, Yunpeng Cai
:
Machine-learning-based prediction of cardiovascular events for hyperlipidemia population with lipid variability and remnant cholesterol as biomarkers. Health Inf. Sci. Syst. 12(1): 51 (2024) - [j26]Yunpeng Cai:
A generalized integrated framework for urban public transport operations evaluation based on interval neutrosophic TODIM and EDAS technique. Soft Comput. 28(17-18): 10331-10344 (2024) - [j25]Ruiquan Ge
, Yixiao Xia
, Minchao Jiang
, Gangyong Jia
, Xiaoyang Jing
, Ye Li
, Yunpeng Cai
:
HybAVPnet: A Novel Hybrid Network Architecture for Antiviral Peptides Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. 21(5): 1358-1365 (2024) - [c42]Ruitao Xie, Jingbang Chen, Limai Jiang, Rui Xiao, Yi Pan, Yunpeng Cai:
Accurate Explanation Model for Image Classifiers using Class Association Embedding. ICDE 2024: 2271-2284 - [c41]Ruitao Xie, Limai Jiang, Xiaoxi He, Yi Pan, Yunpeng Cai:
A Weakly Supervised and Globally Explainable Learning Framework for Brain Tumor Segmentation. ICME 2024: 1-6 - [c40]Limai Jiang, Yi Pan, Yunpeng Cai:
RFIR: A Lightweight Network for Retinal Fundus Image Restoration. ISBRA (1) 2024: 39-51 - [c39]Jiale Hou, Zikai Wang, Haoran Lu, Xinzhe Pang, Yunpeng Cai:
gaBERT: An Interpretable Pretrained Deep Learning Framework for Cancer Gene Marker Discovery. ISBRA (1) 2024: 395-407 - [i7]Juan He, Xiaoyan Wang, Long Chen, Yunpeng Cai, Zhengshan Wang:
Deep Learning Method to Predict Wound Healing Progress Based on Collagen Fibers in Wound Tissue. CoRR abs/2405.05297 (2024) - [i6]Ruitao Xie, Jingbang Chen, Limai Jiang, Rui Xiao, Yi Pan, Yunpeng Cai:
Accurate Explanation Model for Image Classifiers using Class Association Embedding. CoRR abs/2406.07961 (2024) - [i5]Ruitao Xie, Limai Jiang, Xiaoxi He, Yi Pan, Yunpeng Cai:
A Weakly Supervised and Globally Explainable Learning Framework for Brain Tumor Segmentation. CoRR abs/2408.01191 (2024) - 2023
- [j24]Hongwei Chen
, Yunpeng Cai, Chaojie Ji
, Gurudeeban Selvaraj
, Dongqing Wei, Hongyan Wu
:
AdaPPI: identification of novel protein functional modules via adaptive graph convolution networks in a protein-protein interaction network. Briefings Bioinform. 24(1) (2023) - [j23]Yonglin Dou, Jing Xia, Mengmeng Fu, Yunpeng Cai, Xianghong Meng
, Yang Zhan
:
Identification of epileptic networks with graph convolutional network incorporating oscillatory activities and evoked synaptic responses. NeuroImage 284: 120439 (2023) - [j22]Yuhang An
, Jihui Ma, Tuanwei Xu
, Yunpeng Cai
, Huiyong Liu, Yuting Sun, Wenfa Yan
:
Traffic Vibration Signal Analysis of DAS Fiber Optic Cables with Different Coupling Based on an Improved Wavelet Thresholding Method. Sensors 23(12): 5727 (2023) - [j21]Chaojie Ji
, Yijia Zheng
, Ruxin Wang
, Yunpeng Cai, Hongyan Wu
:
Graph Polish: A Novel Graph Generation Paradigm for Molecular Optimization. IEEE Trans. Neural Networks Learn. Syst. 34(5): 2323-2337 (2023) - [c38]Yunzhan Wang, Jin Yang, Yunpeng Cai:
VirusBERTHP: Improved Virus Host Prediction Via Attention-based Pre-trained Model Using Viral Genomic Sequences. BIBM 2023: 678-683 - [i4]Ruitao Xie, Jingbang Chen, Limai Jiang, Rui Xiao, Yi Pan, Yunpeng Cai:
Active Globally Explainable Learning for Medical Images via Class Association Embedding and Cyclic Adversarial Generation. CoRR abs/2306.07306 (2023) - 2022
- [j20]Weilin Zang
, Fangmin Sun
, Yunpeng Cai, Ye Li
:
Transmit Beamforming for Ambient Backscatter Communication Enabled Wireless Body Area Network in Multiuser MISO System. IEEE Trans. Cogn. Commun. Netw. 8(4): 1839-1847 (2022) - [j19]Chaojie Ji
, Hongwei Chen
, Ruxin Wang
, Yunpeng Cai, Hongyan Wu
:
Smoothness Sensor: Adaptive Smoothness-Transition Graph Convolutions for Attributed Graph Clustering. IEEE Trans. Cybern. 52(12): 12771-12784 (2022) - [c37]Yu Xu
, Chonghao Wang, Zeming Li
, Yunpeng Cai, Ouzhou Young, Aiping Lyu, Lu Zhang:
A machine learning model for disease risk prediction by integrating genetic and non-genetic factors. BIBM 2022: 868-871 - [c36]Bokai Yang, Ying Nan Zuo, Shunxiang Yang, Genqiang Deng, Suisong Zhu, Yunpeng Cai:
M-US-EMRs: A Multi-modal Data Fusion Method of Ultrasonic Images and Electronic Medical Records Used for Screening of Coronary Heart Disease. ISBRA 2022: 88-99 - 2021
- [j18]Yujie Yang
, Ye Li, Runge Chen
, Jing Zheng, Yunpeng Cai
, Giancarlo Fortino:
Risk Prediction of Renal Failure for Chronic Disease Population Based on Electronic Health Record Big Data. Big Data Res. 25: 100234 (2021) - [j17]Jing Zheng, Zhongjun Gao, Lixin Pu, Mingjie He, Jipeng Fan, Shuang Wang, Yunpeng Cai, Limin He:
Analysis of Tumor Disease Patterns Based on Medical Big Data. J. Medical Imaging Health Informatics 11(2): 478-486 (2021) - [j16]Yunpeng Cai
, Jihui Ma, Wenfa Yan
, Wenyi Zhang
, Yuhang An
:
Aircraft Detection Using Phase-Sensitive Optical-Fiber OTDR. Sensors 21(15): 5094 (2021) - [c35]Yingxiang Zhang, Xiangyun Liao, Li Chen, Hongjun Kang, Yunpeng Cai, Qiong Wang:
Multi-BERT-wwm Model Based on Probabilistic Graph Strategy for Relation Extraction. HIS 2021: 95-103 - [c34]Tujin Zhu, Yunpeng Cai:
Applying Neural Network to Reconstruction of Phylogenetic Tree. ICMLC 2021: 146-152 - 2020
- [j15]Xiaomao Fan, Zhejing Hu, Ruxin Wang
, Liyan Yin, Ye Li, Yunpeng Cai:
A novel hybrid network of fusing rhythmic and morphological features for atrial fibrillation detection on mobile ECG signals. Neural Comput. Appl. 32(12): 8101-8113 (2020) - [i3]Chaojie Ji
, Ruxin Wang, Rongxiang Zhu, Yunpeng Cai, Hongyan Wu
:
HopGAT: Hop-aware Supervision Graph Attention Networks for Sparsely Labeled Graphs. CoRR abs/2004.04333 (2020) - [i2]Chaojie Ji, Yijia Zheng, Ruxin Wang, Yunpeng Cai, Hongyan Wu
:
Graph Polish: A Novel Graph Generation Paradigm for Molecular Optimization. CoRR abs/2008.06246 (2020) - [i1]Chaojie Ji, Hongwei Chen, Ruxin Wang, Yunpeng Cai, Hongyan Wu:
Smoothness Sensor: Adaptive Smoothness-Transition Graph Convolutions for Attributed Graph Clustering. CoRR abs/2009.05743 (2020)
2010 – 2019
- 2019
- [j14]Wei Zheng, Qi Mao, Robert J. Genco, Jean Wactawski-Wende
, Michael Buck, Yunpeng Cai
, Yijun Sun:
A parallel computational framework for ultra-large-scale sequence clustering analysis. Bioinform. 35(3): 380-388 (2019) - [j13]Yunpeng Cai
, Anand Savanth
, Pranay Prabhat
, James Myers, Alex S. Weddell
, Tom J. Kazmierski
:
Ultra-Low Power 18-Transistor Fully Static Contention-Free Single-Phase Clocked Flip-Flop in 65-nm CMOS. IEEE J. Solid State Circuits 54(2): 550-559 (2019) - [c33]Juan He, Qianyin Li, Zhiyong Tao, Kai Zhang, Yunpeng Cai:
Finding High-Order Homologous Microbe Community Modules via Network Embedding. BIBE 2019: 78-85 - 2018
- [j12]Fen Miao, Yunpeng Cai, Yu-Xiao Zhang, Xiaomao Fan, Ye Li
:
Predictive Modeling of Hospital Mortality for Patients With Heart Failure by Using an Improved Random Survival Forest. IEEE Access 6: 7244-7253 (2018) - [j11]Yingying Wang
, Hongyan Wu
, Yunpeng Cai:
A benchmark study of sequence alignment methods for protein clustering. BMC Bioinform. 19-S(19): 95-104 (2018) - [j10]Xiaomao Fan
, Qihang Yao, Yunpeng Cai, Fen Miao
, Fangmin Sun
, Ye Li
:
Multiscaled Fusion of Deep Convolutional Neural Networks for Screening Atrial Fibrillation From Single Lead Short ECG Recordings. IEEE J. Biomed. Health Informatics 22(6): 1744-1753 (2018) - [c32]Qihang Yao, Xiaomao Fan, Yunpeng Cai, Ruxin Wang
, Liyan Yin, Ye Li:
Time-Incremental Convolutional Neural Network for Arrhythmia Detection in Varied-Length Electrocardiogram. DASC/PiCom/DataCom/CyberSciTech 2018: 754-761 - [c31]Zhuoyuan Zheng, Yunpeng Cai, Yujie Yang, Ye Li:
Sparse Weighted Naive Bayes Classifier for Efficient Classification of Categorical Data. DSC 2018: 691-696 - [c30]Lu Zhang, Qi Li, Ye Li, Yunpeng Cai:
A Distributed Storage Model for Healthcare Big Data Designed on HBase. EMBC 2018: 4101-4105 - [c29]Bokai Yang, Guangzhe Dai, Yujie Yang, Darong Tang, Qi Li, De-nan Lin, Jing Zheng, Yunpeng Cai:
Automatic Text Classification for Label Imputation of Medical Diagnosis Notes Based on Random Forest. HIS 2018: 87-97 - [c28]Xiaomao Fan, Qihang Yao, Yunpeng Cai, Ye Li:
An efficient automatic electrocardiogram analysis method using smartphones. ICCE 2018: 1-5 - 2017
- [j9]Xiaomao Fan, Runge Chen, Chenguang He, Yunpeng Cai, Pu Wang, Ye Li
:
Toward Automated Analysis of Electrocardiogram Big Data by Graphics Processing Unit for Mobile Health Application. IEEE Access 5: 17136-17148 (2017) - [j8]Yunpeng Cai
, Wei Zheng, Jin Yao, Yujie Yang, Volker Mai
, Qi Mao, Yijun Sun:
ESPRIT-Forest: Parallel clustering of massive amplicon sequence data in subquadratic time. PLoS Comput. Biol. 13(4) (2017) - [c27]Runge Chen, Yujie Yang, Fen Miao, Yunpeng Cai, De-nan Lin, Jing Zheng, Ye Li:
3-year risk prediction of Coronary Heart Disease in hypertension patients: A preliminary study. EMBC 2017: 1182-1185 - [c26]Yingying Wang, Jianfeng Liu, Haibo Yu, Yunpeng Cai:
Analyses of the Dual Immune Roles Cytokines Play in Ischemic Stroke. HIS 2017: 113-120 - [c25]Yunpeng Cai, Anand Savanth
, Pranay Prabhat
, James Myers, Alex S. Weddell
, Tom J. Kazmierski:
Evaluation and analysis of single-phase clock flip-flops for NTV applications. PATMOS 2017: 1-6 - 2015
- [j7]Zhuoyuan Zheng, Yunpeng Cai, Ye Li:
Oversampling Method for Imbalanced Classification. Comput. Informatics 34(5): 1017-1037 (2015) - [j6]Miaomiao Zhao, Yunpeng Cai, Jiankui He, Guanyu Wang, Dongqing Wei
, Yanjie Wei, Caiwan Zhang, Fengfeng Zhou
:
Personalized clinical data screening: Special issue on health informatics. Comput. Biol. Medicine 61: 161-162 (2015) - [j5]Fen Miao, Yunpeng Cai, Yu-Xiao Zhang, Ye Li
, Yuan-Ting Zhang
:
Risk Prediction of One-Year Mortality in Patients with Cardiac Arrhythmias Using Random Survival Forest. Comput. Math. Methods Medicine 2015: 303250:1-303250:10 (2015) - [c24]Wenzhi Liu, Qi Li, Yunpeng Cai, Ye Li, Xiaoyan Li:
A prototype of healthcare big data processing system based on Spark. BMEI 2015: 516-520 - [c23]Yingying Wang, Zichun Zeng, Yunpeng Cai:
Identification of Schizophrenia-Associated Gene Polymorphisms Using Hybrid Filtering Feature Selection with Structural Information. HIS 2015: 174-184 - [c22]Furu Xiang, Wenxuan Guan, Xingxian Huang, Xiaomao Fan, Yunpeng Cai, Haibo Yu:
Mobile Clinical Scale Collection System for In-Hospital Stroke Patient Assessments Using Html5 Technology. HIS 2015: 185-194 - [c21]Qi Mao, Wei Zheng, Li Wang, Yunpeng Cai, Volker Mai
, Yijun Sun:
Parallel Hierarchical Clustering in Linearithmic Time for Large-Scale Sequence Analysis. ICDM 2015: 310-319 - 2014
- [j4]Huahua Xiong
, Dan Wu
, Xiaohong Tian, Wan-Hua Lin, Chunyue Li, Heye Zhang, Yunpeng Cai
, Yuan-Ting Zhang
:
The Relationship between the 24 h Blood Pressure Variability and Carotid Intima-Media Thickness: A Compared Study. Comput. Math. Methods Medicine 2014: 303159:1-303159:9 (2014) - [j3]Yingying Wang
, Xiaomao Fan, Yunpeng Cai:
A comparative study of improvements Pre-filter methods bring on feature selection using microarray data. Health Inf. Sci. Syst. 2(1): 7 (2014) - [c20]Fen Miao, Yunpeng Cai, Yuan-Ting Zhang
:
Risk prediction for heart failure incidence within 1-year using clinical and laboratory factors. EMBC 2014: 1790-1793 - [c19]Yingying Wang, Yunpeng Cai:
A network-based analysis of ischemic stroke using parallel microRNA-mRNA expression profiles. GlobalSIP 2014: 1414-1417 - [c18]Zhuoyuan Zheng, Ye Li, Yunpeng Cai:
An Analysis on Risk Factors of Chronics Diseases Based on GRI. HIS 2014: 40-46 - [c17]Yingying Wang, Xiaomao Fan, Yunpeng Cai:
A Comparative Study of Improvements Filter Methods Bring on Feature Selection Using Microarray Data. HIS 2014: 55-62 - [c16]Jie Yang, Henry C. M. Leung, Siu-Ming Yiu, Yunpeng Cai, Francis Y. L. Chin:
Learning Sparse Gaussian Bayesian Network Structure by Variable Grouping. ICDM 2014: 1073-1078 - 2013
- [c15]Yujie Yang, Yunpeng Cai, Wenshu Luo, Zhifeng Li, Zhenghui Ma, Xiaolu Yu, Haibo Yu:
An ontology-based approach for text mining of stroke electronic medical records. BIBM 2013: 288-291 - [c14]Jie Yang, Henry C. M. Leung, Siu-Ming Yiu, Yunpeng Cai, Francis Y. L. Chin:
Intra- and inter-sparse multiple output regression with application on environmental microbial community study. BIBM 2013: 404-409 - 2012
- [j2]Yijun Sun, Yunpeng Cai, Susan M. Huse, Rob Knight
, William G. Farmerie, Xiaoyu Wang, Volker Mai
:
A large-scale benchmark study of existing algorithms for taxonomy-independent microbial community analysis. Briefings Bioinform. 13(1): 107-121 (2012) - [c13]Xiaomao Fan, Chenguang He, Yunpeng Cai, Ye Li:
HCloud: A novel application-oriented cloud platform for preventive healthcare. CloudCom 2012: 705-710 - 2010
- [c12]Jiadong Yang, Hua Xu, Yunpeng Cai, Peifa Jia:
Effective structure learning for EDA via L1-regularizedbayesian networks. GECCO 2010: 327-334 - [c11]Yunpeng Cai, Yijun Sun, Yubo Cheng, Jian Li, Steve Goodison:
Fast Implementation of ℓ1Regularized Learning Algorithms Using Gradient Descent Methods. SDM 2010: 862-871
2000 – 2009
- 2009
- [j1]Yunpeng Cai, Hua Xu, Xiaomin Sun, Peifa Jia, ZeHua Liu:
Duple-EDA and sample density balancing. Sci. China Ser. F Inf. Sci. 52(9): 1640-1650 (2009) - [c10]Liguo Deng, Yunpeng Cai, Chen Wang, Yan Jiang:
Fuzzy Temporal Logic on Fuzzy Temporal Constraint Networks. FSKD (6) 2009: 272-276 - [c9]Yunpeng Cai, Yijun Sun, Jian Li, Steve Goodison:
Online Feature Selection Algorithm with Bayesian l1 Regularization. PAKDD 2009: 401-413 - 2008
- [c8]Yijun Sun, Yunpeng Cai, Steve Goodison:
Combining nomogram and microarray data for predicting prostate cancer recurrence. BIBE 2008: 1-7 - [c7]Yubo Cheng, Yunpeng Cai, Yijun Sun, Jian Li:
Semi-supervised feature selection under logistic I-RELIEF framework. ICPR 2008: 1-4 - 2007
- [c6]Yunpeng Cai, Xiaomin Sun, Hua Xu, Peifa Jia:
Cross entropy and adaptive variance scaling in continuous EDA. GECCO 2007: 609-616 - 2006
- [c5]Yunpeng Cai, Xiaomin Sun, Peifa Jia:
Probabilistic modeling for continuous EDA with Boltzmann selection and Kullback-Leibeler divergence. GECCO 2006: 389-396 - 2004
- [c4]Yunpeng Cai, Xiaomin Sun, Peifa Jia:
Negative correlation learning approach for T-S fuzzy models. SMC (3) 2004: 2254-2259 - 2003
- [c3]Jinyi Yao, Ni Lao, Fan Yang, Yunpeng Cai, Zengqi Sun:
Technical Solutions of TsinghuAeolus for Robotic Soccer. RoboCup 2003: 205-213 - 2001
- [c2]Yunpeng Cai, Jiang Chen, Jinyi Yao, Shi Li:
Global Planning from Local Eyeshot: An Implementation of Observation-Based Plan Coordination in RoboCup Simulation Games. RoboCup 2001: 12-21 - [c1]Jinyi Yao, Jiang Chen, Yunpeng Cai, Shi Li:
Architecture of TsinghuAeolus. RoboCup 2001: 491-494
Coauthor Index

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